BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E05LP1|AL429909
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1133 680 0.0
>3x_Contig1133
Length = 4723
Score = 680 bits (341), Expect = 0.0
Identities = 735/866 (84%), Gaps = 6/866 (0%)
Strand = Plus / Plus
Query: 31 agaaaatacaacagtagaagtggtagatgtttaatgagtttttggtagaagaaattgatg 90
|||||||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||
Sbjct: 3177 agaaaatacaacagtacaagtggtacatgtttaatgactttttggtacaagaaattgatg 3236
Query: 91 aggatgagggtttaaatatttgcgtagtggtggaaaagagcgagaaattgttgtttattg 150
||||||||| ||||||||||| |||| |||||||||| | | |||||||||||||||||
Sbjct: 3237 aggatgaggctttaaatattt-cgtactggtggaaaacacc-agaaattgttgtttattc 3294
Query: 151 tgatggggaagaaatgagaaagggatttgtttgagtttggaaattaaaggttgagagaga 210
||||| ||||||||| |||||| |||||||| ||||| ||||||||||||||| | |||
Sbjct: 3295 tgatgcggaagaaatcagaaagccatttgtttcagtttcgaaattaaaggttgacacaga 3354
Query: 211 gatggtatatggtgagtatttgagtgaggggattagaaaagaggtgataagagaatagag 270
|| ||||| |||| ||||| |||||||| ||||||||||| ||||||||| |||| ||
Sbjct: 3355 catcctatatcgtgactatttcagtgagggcattagaaaagacgtgataagacaatacag 3414
Query: 271 agtattgagtaaagatgaaggaggaggaggcggggaggttagttgggcttggagggggaa 330
| |||||| ||||||||||| | |||| |||| | ||||||| |||||| | ||||
Sbjct: 3415 actattgactaaagatgaagcaccaggac-cgggcaccttagttgc-cttggacgcggaa 3472
Query: 331 ttggtgtgtttgagagaaggcgctagttggaaatgaattgtaaaggtatgaaaaggttgg 390
|| |||| ||||| |||| | || |||||||| ||||||||||||||||||| |||
Sbjct: 3473 ttcgtgtctttgacagaa--ccgtacttggaaatcaattgtaaaggtatgaaaaccttgc 3530
Query: 391 ttaaaggaggtaagaagtgtttgggtggtgtatgtttgttgagaggtgaaggtgagttgg 450
||||| || |||||||| ||||| | |||||| ||||||||||||||||||||||||||
Sbjct: 3531 ttaaaccagctaagaagtctttggctcgtgtatctttgttgagaggtgaaggtgagttgg 3590
Query: 451 aaggtgttggattgattgatgagtatattataaatgagtgtgatatggaggattatgtaa 510
|||||||| ||| |||||||| |||||||||||||||||| |||| ||||||||| |||
Sbjct: 3591 aaggtgttccattcattgatgactatattataaatgagtgtcatatcgaggattatctaa 3650
Query: 511 gggaattgagtggtatggagggaggagagttggatggaaaagtgagtaaaaaaagtttgg 570
|||| |||||||| ||| |||||| |||||| |||| ||||||||||||||||||
Sbjct: 3651 cccaattcagtggtatcgagccaggagacttggatccaaaactgagtaaaaaaagtttgg 3710
Query: 571 ttaaaagagaagtgttttagagaaaaatgtggttagtagttgaattgggatgtgtttttg 630
|||||||| |||| ||||| ||||||||||||||| || || ||||||||||||||||||
Sbjct: 3711 ttaaaagacaagtcttttacagaaaaatgtggttactacttcaattgggatgtgtttttg 3770
Query: 631 taggagatggattaaggactgatttgagagagatgaatatatatgtgggmcaatgtgaaa 690
||||| ||||||||| | |||||| ||| |||| ||||||||||| ||| | |||
Sbjct: 3771 taggacatggattaaccaatgatttcagacagatcaatatatatgtcccagaatctcaaa 3830
Query: 691 ttagagagaggtsgttgtattatttaaaagggaaaagatatgtttgtgtacgtyatttgg 750
||||||| | || |||||||||||||||||||||||||||| ||| | ||||| ||||||
Sbjct: 3831 ttagagacacgtcgttgtattatttaaaagggaaaagatatctttctctacgttatttgg 3890
Query: 751 ggtcgggggytttgagaaaagaggtggraasaggaaatgatsagtggatcgaagagggag 810
|| | || |||||||||| ||||| || ||||||| || | | |||||||| | |
Sbjct: 3891 cgttcgcggttttgagaaaacaggtgcaaacaggaaatcatgactccatcgaagacgcac 3950
Query: 811 atmgtgcgttgttagtttatagaaagtatttggaggtaaaggagaagggtgtwtttgaaa 870
|| |||||||||| |||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 3951 atactgcgttgttactttatagaaagtatttggagctaaaggagaagggtgtatttgaaa 4010
Query: 871 tgtatgtagagaagatttatgatgaa 896
||||| ||||||| ||||||||||||
Sbjct: 4011 tgtatctagagaacatttatgatgaa 4036
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7238
Number of Sequences: 1807
Number of extensions: 7238
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)